PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_223670_usns.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 239aa    MW: 25657 Da    PI: 10.15
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_223670_usns.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.7e-061221611054
                         HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         + RR+++ ++++ L++l+ +      +K + a++L +A+ YI+ L
  Bv9_223670_usns.t1 122 KGRREKLGERISVLQQLVSPY-----GKTDTASVLHEAIGYIRFL 161
                         78*****************99.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.769112161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-4118167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.15E-5121166No hitNo description
SuperFamilySSF474593.79E-12121172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-8122169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MGEKGRFDGE IQLPGGSFSR LLLSSDDVED KTLCLHSPLF SCNTPKMLCF GDFNSKITPK  60
VTLSTVNDKI TVSNSNKRRN GSGKESGHGS GNGQKQKNGM MKKNKPEMGS TIVTTSVPGH  120
AKGRREKLGE RISVLQQLVS PYGKTDTASV LHEAIGYIRF LHDQVKVLST PYLKRLPPSP  180
SAQQSIPDEG GANAKANSTE GLRSRGLCLI PMESMFHVAN SNGADFWSSA TIRSSGSSG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010691655.11e-177PREDICTED: transcription factor bHLH113-like
SwissprotQ9LT672e-41BH113_ARATH; Transcription factor bHLH113
TrEMBLA0A0J8BI721e-177A0A0J8BI72_BETVU; Uncharacterized protein
STRINGVIT_03s0091g00210.t014e-55(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.14e-37bHLH family protein